Influenza Weekly Surveillance Update Produced by: Bureau of Epidemiology, Florida Department of Health Produced on:
February 1, 2012
The Florida Department of Health (FDOH) monitors multiple surveillance systems such as the Electronic Surveillance System for the Early Notification of Community-based Epidemics (ESSENCE), the Florida Pneumonia and Influenza Mortality Surveillance System (FPIMSS), notifiable disease reports (Merlin), EpiCom, and Florida ILINet in order to track influenza activity in the state.
For additional surveillance graphs and data, please view the complete report: Bureau of Epidemiology Weekly Influenza Surveillance Report
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List of Tables, Figures, and Maps
NREVSS Respiratory Virus Surveillance Figure 1. Percentage of Positive Respiratory Virus Tests as Collected by NREVSS (text-only version)
ESSENCE Syndromic Surveillance Summary-Statewide Figure 2. Percentage of Influenza-Like Illness from Emergency Department Chief Complaints, Florida ESSENCE Participating Hospitals (text-only version) Figure 3.Percent of Influenza-Like Illness Chief Complaints, by Age Group, Florida ESSENCE Participating Hospitals (text-only version)
Figure 4. Percentage of ED Visits Resulting for ILI Resulting in Hospital
Admission, Hospitals Reporting Discharge Disposition (text-only version)
ESSENCE Syndromic Surveillance Summary-Regional Map 1. Florida's Regional Domestic Security Task Force Regions Table 1. List of Counties by Regional Domestic Security Task Force Regions Figure 5. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 1 ESSENCE Participating Hospitals (text-only version) Figure 6. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 2 ESSENCE Participating Hospitals (text-only version) Figure 7. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 3 ESSENCE Participating Hospitals (text-only version) Figure 8. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 4 ESSENCE Participating Hospitals (text-only version) Figure 9. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 5 ESSENCE Participating Hospitals (text-only version) Figure 10. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 6 ESSENCE Participating Hospitals (text-only version) Figure 11. Percentage of ILI from Emergency Department Chief Complaints RDSTF Region 7 ESSENCE Participating Hospitals (text-only version)
Bureau of Laboratories Viral Surveillance Figure 12. Number of Influenza-Positive Specimens Tested by the Florida Bureau of Laboratories by Subtype by Lab Event Date* (text-only version) Figure 13. Number of Specimens Tested by Florida Bureau of Laboratories and Percent Positive for Influenza by Lab Event Date* (text-only version)
County Influenza Activity Map 2. Weekly County Influenza Activity Map Table 1. Weekly County Influenza Activity Figure 14. Number of Counties Reporting Localized or Widespread Activity (text-only version)
Florida Pneumonia and Influenza Mortality Surveillance Figure 15. Pneumonia and Influenza Deaths for 24 Florida Counties (text-only version) Figure 16. Pneumonia and Influenza Deaths in 3 Age Groups for 24 Florida Counties (text-only version)
ILINet Influenza-Like Surveillance-Statewide Figure 17. Percentage of Visits for Influenza-like Illness Reported by ILINet Sentinel Providers by Region (text-only version)
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NREVSS Respiratory Virus
Surveillance
FIGURE 1: Percentage of Positive Respiratory Virus Tests as Collected by NREVSS,
Florida, 2010-2011, as of February 1, 2012
FIGURE 1 shows the percentage of positive tests for multiple respiratory viruses reported by NREVSS-participating laboratories in Florida. |
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ESSENCE Syndromic Surveillance Summary - Statewide
FIGURE 2: Influenza-like Illness Visits (by Chief Complaint) to Emergency Departments (ED) as a Percentage of All ED Visits, Florida ESSENCE
Participating Hospitals (N=174) Week 40, 2008 through February 1, 2012
*There is no week 53 for
the 2007-2008, 2009-2010, and 2010-2011 seasons; the week 53 data point for
those seasons is a average of weeks 52 and 1.
Figure 2 shows ESSENCE
data on ILI visits to EDs as a percentage of all ED visits.
FIGURE 3: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints by Age, Florida ESSENCE Participating Hospitals (N=174),
Week 40, 2009 through February 1, 2012

Figure 3 shows
percentage of ILI among all ED visits by age group.
FIGURE 4: Percentage of
ED Visits Resulting for ILIResulting in Hospital
Admission, Hospitals Reporting Discharge Disposition (N=105),
Week 40, 2010 to Week 4, 2012

Figure 4 shows the
percentage of ED visits for ILI that resulted in hospitalization, by age group.
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ESSENCE Syndromic Surveillance Summary - Regional
MAP 1: Hospitals Reporting Emergency Department (ED) Data to Florida ESSENCE,
February 1, 2012 (N=174)

TABLE 1: List of Counties by Regional Domestic Security Task Force Regions
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Region |
Counties |
| 1 |
Bay, Calhoun, Escambia, Gulf, Holmes, Jackson, Okaloosa, Santa Rosa, Walton, Washington |
| 2 |
Columbia, Dixie, Franklin, Gadsden, Hamilton, Jefferson, Lafayette, Leon, Liberty, Madison, Suwannee, Taylor, Wakulla |
| 3 |
Alachua, Baker, Bradford, Clay, Duval, Flagler, Gilchrist, Levy, Marion, Nassau, Putnam, St. Johns, Union |
| 4 |
Citrus, Hardee, Hernando, Hillsborough, Pasco, Pinellas, Polk, Sumter |
| 5 |
Brevard, Indian River, Lake, Martin, Orange, Osceola, Seminole, St. Lucie, Volusia |
| 6 |
Charlotte, Collier, DeSoto, Glades, Hendry, Highlands, Lee, Manatee, Okeechobee, Sarasota |
| 7 |
Broward, Miami-Dade, Monroe, Palm Beach |
FIGURE 5: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 1 ESSENCE Participating Hospitals (N=5),
Week 40, 2008 through February 1, 2012

FIGURE 6: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 2 ESSENCE Participating Hospitals (N=1),
Week 1, 2009 through February 1, 2012

FIGURE 7: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 3 ESSENCE Participating Hospitals (N=14),
Week 40, 2008 through February 1, 2012

FIGURE 8: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 4 ESSENCE Participating Hospitals (N=31),
Week 40, 2008 through February 1, 2012

FIGURE 9: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 5 ESSENCE Participating Hospitals (N=49),
Week 40, 2008 through February 1, 2012

FIGURE 10: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 6 ESSENCE Participating Hospitals (N=15),
Week 40, 2008 through February 1, 2012

FIGURE 11: Percentage of Influenza-like Illness from Emergency Department (ED) Chief Complaints, RDSTF Region 7 ESSENCE Participating Hospitals (N=48), Week 40, 2008 through
February 1, 2012

*There is no week 53 for
the 2009-2010, 2010-2011 and 2011-2012 seasons; the week 53 data point for
those seasons is a average of weeks 52 and 1.
**Historical data for region 2 is only available beginning week 1, 2009.
Figure 5 - Figure 11 describe ED chief complaint data from ESSENCE by Regional Domestic Security Task Force
(RDSTF).
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Bureau of Laboratories Viral Surveillance
FIGURE 12: Number of Influenza-Positive Specimens Tested by the Florida Bureau of Laboratories (BOL)
by Subtype by Lab Event Date* Week 1, 2010 to Week 4, 2012 as Reported in
Merlin by 11:30 a.m. February 1, 2012

FIGURE 13: Number of Specimens Tested by Florida Bureau of Laboratories (BOL) and Percent Positive for Influenza by Lab Event Date* Week 1, 2010 to Week
4, 2012 as Reported in Merlin by 11:30 a.m.
February 1, 2012

FIGURES 12 and 13 use BOL viral surveillance data to track the progress of influenza infection over time. They include weekly information on how many specimens are tested by the BOL, what proportion of those test positive for influenza, and what subtypes are found for the positive influenza specimens.
*Please note that lab event date is defined as the earliest of the following dates associated with the lab: date collected, date received by the laboratory, date reported, or date inserted.
For county-specific laboratory data, please refer to the Flu Lab Report in Merlin. For instructions on how to use the Flu Lab Report, please see the Guidelines for the Flu Lab Report in Merlin. |
County Influenza Activity
MAP 2: Weekly County Influenza
Activity for Week 4 as Reported by
12:00 p.m. February 1, 2012
County influenza activity levels are reported by county health department epidemiologists.*

TABLE 2: Weekly County Influenza Activity for Week
4 as Reported by 12:00 p.m.
February 1, 2012
| Activity Level |
Week 3 Number of Counties |
Week 4 Number of Counties |
Week
4 Counties |
| No Report |
- |
- |
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| No Activity |
36 |
42 |
Baker, Bay, Bradford, Charlotte, Citrus, Columbia, Dixie, Escambia, Flagler, Franklin,
Gadsden, Gilchrist, Glades, Gulf, Hamilton, Hendry, Hernando, Highlands, Holmes, Indian River,
Jackson, Jefferson, Leon, Levy, Liberty, Madison, Monroe, Nassau,
Okaloosa, Okeechobee, Pasco, Pinellas, Putnam, Santa Rosa, St. Johns, Sumter,
Suwannee, Taylor,
Union, Wakulla, Walton, Washington |
| Sporadic |
31 |
24 |
Alachua, Brevard, Broward,
Calhoun, Clay, Collier, Dade, Desoto, Duval, Hardee, Hillsborough,
Lafayette, Lake,
Lee, Manatee, Marion,
Martin, Orange, Osceola, Palm Beach, Polk, Sarasota,
St. Lucie, Volusia |
| Localized |
- |
1 |
Seminole |
| Widespread |
- |
- |
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FIGURE 14: Number of Counties Reporting Localized or Widespread Activity, 2009-2010 (Weeks 40-20), 2010-2011 (Weeks 40-20), and 2011-2012
(Week 40-4) as Reported by 10:00 a.m. February 1, 2012

Figure 14 shows the number of counties reporting localized or widespread activity, 2009-2010,
2010-2011, and 2011-2012.
*There is no week 53 for
the 2007-2008, 2009-2010, and 2010-2011 seasons; the week 53 data point for
those seasons is a average of weeks 52 and 1. **As of Week 40, 2010, the influenza activity code categorizations have changed. Please see http://www.doh.state.fl.us/disease_ctrl/epi/FluActivityDef.htm for explanations of previous year activity code interpretations. |
Florida Pneumonia and Influenza Mortality Surveillance
FIGURE 15: Pneumonia and Influenza Deaths for 24 Florida Counties, 2008-2009 (Weeks 40-39), 2009-2010 (Weeks 40-39), 2010-2011 (Week 40-20)
and 2011-2012 (Week 40-3) as Reported to FPIMSS by 5:00 p.m.
January 28, 2012

*There is no week 53 for 2007-2008, 2009-2010,
and 2010-2011 seasons; the week 53 data point for those seasons is an average of week 52 and 1.
Figure 15 shows Pneumonia
and Influenza Deaths for 24 Florida Counties, 2008-2009, 2009-2010, 2010-2011,
and 2011-2012.
For week 4 (ending January 28) there were 130 deaths reported and no excess deaths.
FIGURE 16: Pneumonia and Influenza Deaths in 4 Age Groups for 24 Florida Counties, Week
40, 2009 - Week
4, 2012 as Reported to FPIMSS by 5:00 p.m.
January 28, 2012

Figure 16 shows
Pneumonia and Influenza Deaths for 24 Florida Counties.
24 of 24 participating counties reported data for week 4.
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ILINet Influenza-like Surveillance-Statewide
FIGURE 17: Percentage of Visits for Influenza-like Illness* Reported by ILINet Sentinel Providers Statewide, 2008-2009 (Weeks 40-39), 2009-2010 (Weeks 40-23),
2010-2011 (Week 40-20), and 2011-2012 (Week 40-4)
as Reported by 5:00 p.m.
January 28, 2012

*ILI = Influenza-like illness, fever >100°F AND sore throat and/or cough in the absence of another known cause. **The 2009 - 10 threshold for moderate activity is calculated from ILINet data. The threshold for moderate activity is the mean percentage of patient visits for ILI during influenza weeks for the previous three seasons plus two standard deviations. Only weeks with 10% or greater of laboratory specimens testing positive are included in the calculation. Due to wide variability in regional level data, it is not appropriate to apply the state baseline to regional data. ^There was no week 53 during the 2006-07, 2007-08, and 2008-2009 seasons; the week 53 data point for those seasons is an average of weeks 52 and 1. |
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